[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 10,334 items for (author: zhang & n)

EMDB-39368:
Extracellular domain of Vgamma5 Vdelta1 TCR (DeepEMhancer)
Method: single particle / : Xin W, Huang B, Chi X, Xu M, Zhang Y, Li X, Su Q, Zhou Q

EMDB-38828:
Closed conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38829:
1up-1 conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38830:
1up-2 conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38831:
2up-1 conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38832:
2up-TM conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38833:
3up-TM conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38834:
The closed conformation of the HKU1-B S protein in the apo state
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38835:
The 1up conformation of the HKU1-B S protein in the apo state
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-38836:
The closed conformation of the HKU1-B S protein in the apo state
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8y19:
Closed conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8y1a:
1up-1 conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8y1b:
1up-2 conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8y1c:
2up-1 conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8y1d:
2up-TM conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8y1e:
3up-TM conformation of HKU1-B S protein after incubation of the receptor
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8y1f:
The closed conformation of the HKU1-B S protein in the apo state
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8y1g:
The 1up conformation of the HKU1-B S protein in the apo state
Method: single particle / : Xia LY, Zhang YY, Zhou Q

PDB-8y1h:
The closed conformation of the HKU1-B S protein in the apo state
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-37342:
Structural mechanism of inhibition of the Rho transcription termination factor by Rof
Method: single particle / : Zhang J, Wang C

PDB-8w8d:
Structural mechanism of inhibition of the Rho transcription termination factor by Rof
Method: single particle / : Zhang J, Wang C

EMDB-36849:
Nipah virus Attachment glycoprotein with 41-6 antibody fragment
Method: single particle / : Sun MM

PDB-8k3c:
Nipah virus Attachment glycoprotein with 41-6 antibody fragment
Method: single particle / : Sun MM

EMDB-43490:
Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site and deacyl-tRNA in the E site of E. coli 70S ribosome
Method: single particle / : Teran D, Zhang Y, Korostelev AA

EMDB-43491:
Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site of E. coli 70S ribosome
Method: single particle / : Teran D, Zhang Y, Korostelev AA

PDB-8vs9:
Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site and deacyl-tRNA in the E site of E. coli 70S ribosome
Method: single particle / : Teran D, Zhang Y, Korostelev AA

PDB-8vsa:
Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site of E. coli 70S ribosome
Method: single particle / : Teran D, Zhang Y, Korostelev AA

EMDB-36760:
Cryo-EM structure of conformation 1 of complex of Nipah virus attachment glycoprotein G with 1E5 neutralizing antibody
Method: single particle / : Sun MM

EMDB-36761:
Cryo-EM structure of conformation 2 of complex of Nipah virus attachment G with 1E5 neutralizing antibody
Method: single particle / : Sun M

EMDB-34495:
type I-B Cascade bound to a PAM-containing dsDNA target at 3.8 angstrom resolution.
Method: single particle / : Xiao Y, Lu M, Yu C, Zhang Y

PDB-8h67:
type I-B Cascade bound to a PAM-containing dsDNA target at 3.8 angstrom resolution.
Method: single particle / : Xiao Y, Lu M, Yu C, Zhang Y

EMDB-36980:
Cryo-EM structure of DSR2-TTP
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-36982:
Cryo-EM structure of DSR2-DSAD1 state 2
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-37272:
Cryo-EM structure of DSR2-DSAD1 state 1
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-37497:
Cryo-EM structure of DSR2-TTP
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-37603:
Cryo-EM structure of DSR2-DSAD1
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-38421:
Cryo-EM structure of tail tube protein
Method: single particle / : Zhang H, Li Z, Li XZ

PDB-8k98:
Cryo-EM structure of DSR2-TTP
Method: single particle / : Zhang H, Li Z, Li XZ

PDB-8k9a:
Cryo-EM structure of DSR2-DSAD1 state 2
Method: single particle / : Zhang H, Li Z, Li XZ

PDB-8w56:
Cryo-EM structure of DSR2-DSAD1 state 1
Method: single particle / : Zhang H, Li Z, Li XZ

PDB-8wfn:
Cryo-EM structure of DSR2-TTP
Method: single particle / : Zhang H, Li Z, Li XZ

PDB-8wkn:
Cryo-EM structure of DSR2-DSAD1
Method: single particle / : Zhang H, Li Z, Li XZ

PDB-8xkn:
Cryo-EM structure of tail tube protein
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-34505:
Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state.
Method: single particle / : Zhang W, Zhan X, Zhang X, Lei J, Yan C, Shi Y

PDB-8h6j:
Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state.
Method: single particle / : Zhang W, Zhan X, Zhang X, Lei J, Yan C, Shi Y

PDB-8khf:
Structure of the human ATP synthase bound to bedaquiline (membrane domain)
Method: single particle / : Lai Y, Zhang Y

EMDB-36008:
SIDT1 protein
Method: single particle / : Zhang JT, Jiang DH

EMDB-36009:
transport T2
Method: single particle / : Jiang DH, Zhang JT

PDB-8j6m:
SIDT1 protein
Method: single particle / : Zhang JT, Jiang DH

PDB-8j6o:
transport T2
Method: single particle / : Jiang DH, Zhang JT

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more